With the @RooDbManaged applied the type will be managed when the database reverse engineer command is run . If the table has been dropped from your db, the type will be deleted after the command is executed. If you want to keep the java class and all the fields and methods that get generated after the table has been dropped, just push-in all the fields and methods you want and remove the @RooDbManaged annotation. But it seems you have already done this before, because DBRE doesn't remove the annotation, and never would
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